DNA fingerprinting and assessment of some physiological changes in Al-induced Bryophyllum daigremontianum clones

Aluminum (Al) is one of the most important stress factors that reduce plant productivity in acidic soils. Present work thereby analyzed Al-induced genomic alterations in Bryophyllum daigremontianum clones using RAPD and ISSR markers, and investigated responding changes in photosynthetic pigment (chlorophyll a, b, a/b, total chlorophyll and carotenoid) contents and total soluble protein amounts in plant leaves. The main reason for the use of bulbiferous spurs originated clone plants was to increase reliability and acceptability of RAPD and ISSR techniques in DNA fingerprinting. Raised 40 clone plants were divided into five separate groups each with eight individuals and each experimental group was watered with 0 (control), 0 (acid control), 50, 100 and 200 µM AlCl3-containing Hoagland solutions on alternate days for two and a half months. All plant soils except control group were sprayed with 0.2?ulfuric acid following watering days and this contributed acidic characteristic (pH 4.8) to soil structure. Increase in Al concentrations were accompanied by an increase in total soluble protein amounts, a decrease in photosynthetic pigment contents, and with appearance, disappearance and intensity changes at RAPD and ISSR band profiles. Out of tested RAPD1-25 and ISSR1-15 primers, RAPD8, RAPD9, ISSR2 and ISSR7 primers produced reproducible band profiles that were distinguishable between treatment and control groups. Findings showed that RAPD and ISSR fingerprints have been useful biomarkers for investigation of plant genotoxicity, especially in clone plants. Moreover, if these fingerprints are integrated with other physiological parameters they could become more powerful tools in ecotoxicology

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Название публикации
(dc.title)
DNA fingerprinting and assessment of some physiological changes in Al-induced Bryophyllum daigremontianum clones
Автор/ы
(dc.contributor.yazarlar)
Ibrahim Ilker Ozyigit, Ali Kaval, Ernaz Altundag Cakir, Filiz Vardar
Вид публикации
(dc.type)
Makale
Язык
(dc.language)
İngilizce
Год публикации
(dc.date.issued)
2019
Национальный/Международный
(dc.identifier.ulusaluluslararasi)
Uluslararası
Источник
(dc.relation.journal)
Molecular Biology Reports
Номер
(dc.identifier.issue)
3
Том/№
(dc.identifier.volume)
46
Страница
(dc.identifier.startpage)
2703–2711
ISSN/ISBN
(dc.identifier.issn)
ISSN: 0301-4851; Online ISSN: 1573-4978
Издатель
(dc.publisher)
Springer
Базы данных
(dc.contributor.veritaban)
Web of Science Core Collection
Базы данных
(dc.contributor.veritaban)
Springer
Базы данных
(dc.contributor.veritaban)
Scopus
Вид индекса
(dc.identifier.index)
SCI Expanded
Вид индекса
(dc.identifier.index)
Scopus
Импакт-фактор
(dc.identifier.etkifaktoru)
2,107 / 2018-WOS / 5 Year: 1,707
Резюме
(dc.description.abstract)
Aluminum (Al) is one of the most important stress factors that reduce plant productivity in acidic soils. Present work thereby analyzed Al-induced genomic alterations in Bryophyllum daigremontianum clones using RAPD and ISSR markers, and investigated responding changes in photosynthetic pigment (chlorophyll a, b, a/b, total chlorophyll and carotenoid) contents and total soluble protein amounts in plant leaves. The main reason for the use of bulbiferous spurs originated clone plants was to increase reliability and acceptability of RAPD and ISSR techniques in DNA fingerprinting. Raised 40 clone plants were divided into five separate groups each with eight individuals and each experimental group was watered with 0 (control), 0 (acid control), 50, 100 and 200 µM AlCl3-containing Hoagland solutions on alternate days for two and a half months. All plant soils except control group were sprayed with 0.2?ulfuric acid following watering days and this contributed acidic characteristic (pH 4.8) to soil structure. Increase in Al concentrations were accompanied by an increase in total soluble protein amounts, a decrease in photosynthetic pigment contents, and with appearance, disappearance and intensity changes at RAPD and ISSR band profiles. Out of tested RAPD1-25 and ISSR1-15 primers, RAPD8, RAPD9, ISSR2 and ISSR7 primers produced reproducible band profiles that were distinguishable between treatment and control groups. Findings showed that RAPD and ISSR fingerprints have been useful biomarkers for investigation of plant genotoxicity, especially in clone plants. Moreover, if these fingerprints are integrated with other physiological parameters they could become more powerful tools in ecotoxicology
URL
(dc.rights)
https://link.springer.com/article/10.1007/s11033-019-04714-w
DOI
(dc.identifier.doi)
10.1007/s11033-019-04714-w
Факультет / Институт
(dc.identifier.fakulte)
Fen Fakültesi
Кафедра
(dc.identifier.bolum)
Biyoloji Bölümü
Автор(ы) в учреждении
(dc.contributor.author)
İbrahim İlker ÖZYİĞİT
№ регистрации
(dc.identifier.kayitno)
BL4D712E60
Дата регистрации
(dc.date.available)
2019-06-18
Заметка (Год публикации)
(dc.identifier.notyayinyili)
June 2019
Wos No
(dc.identifier.wos)
WOS:000470332600011
Тематический рубрикатор
(dc.subject)
RAPD
Тематический рубрикатор
(dc.subject)
ISSR
Тематический рубрикатор
(dc.subject)
clone plant
Тематический рубрикатор
(dc.subject)
genotoxicity
Тематический рубрикатор
(dc.subject)
acidic soil
Тематический рубрикатор
(dc.subject)
DNA fingerprinting
Анализы
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